Details for gene set NCI_ARF6 SIGNALING EVENTS[GSEA]

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	NCI_ARF6 SIGNALING EVENTS
Enrichment Score (ES)	-0.44695818
Normalized Enrichment Score (NES)	-1.7748795
Nominal p-value	0.0
FDR q-value	0.20966205
FWER p-Value	0.811

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CTNND1	1422450_at 1437448_s_at 1445830_at	291	1.690	0.0088	No
2	GULP1	1432092_a_at 1453771_at	357	1.620	0.0270	No
3	SDC1	1415943_at 1415944_at 1437279_x_at 1448158_at	569	1.365	0.0352	No
4	YWHAG	1420816_at 1420817_at 1450012_x_at 1459693_x_at	675	1.285	0.0473	No
5	PIK3CA	1423144_at 1429434_at 1429435_x_at 1440054_at 1453134_at 1460326_at	854	1.165	0.0544	No
6	YWHAZ	1416102_at 1416103_at 1436971_x_at 1436981_a_at 1439005_x_at 1443893_at 1448218_s_at 1448219_a_at	986	1.098	0.0628	No
7	RALA	1423137_at 1450870_at 1456049_at	988	1.097	0.0771	No
8	CLTC	1419407_at 1439094_at 1440457_at 1454626_at	1139	1.047	0.0839	No
9	CBL	1434829_at 1446608_at 1450457_at 1455886_at	1207	1.030	0.0944	No
10	LNPEP	1433747_at 1438432_at 1439326_at 1443907_at 1456347_at	1273	1.015	0.1047	No
11	PIK3R1	1425514_at 1425515_at 1438682_at 1444591_at 1451737_at	1613	0.946	0.1015	No
12	AP2M1	1442227_at 1442429_at 1443338_at 1450894_a_at 1457122_at	1737	0.916	0.1079	No
13	IL2RA	1420691_at 1420692_at	2200	0.808	0.0973	No
14	IRS1	1423104_at	2657	0.709	0.0857	No
15	AKT1	1416657_at 1425711_a_at 1440950_at 1442759_at	4445	0.446	0.0096	No
16	PLD2	1417237_at 1457252_x_at	4991	0.392	-0.0103	No
17	GRB2	1418508_a_at 1449111_a_at	5050	0.386	-0.0079	No
18	RPS6KB1	1428849_at 1446376_at 1454956_at 1457562_at 1459951_at 1460705_at	5073	0.384	-0.0038	No
19	EXOC3	1434750_at 1455594_at	5441	0.349	-0.0161	No
20	CPE	1415949_at	5992	0.301	-0.0374	No
21	AVPR2	1450277_at	6025	0.298	-0.0349	No
22	TBC1D4	1435292_at 1455903_at	6186	0.285	-0.0385	No
23	EXOC4	1422684_a_at 1422685_at 1422686_s_at 1431062_a_at 1444609_at 1444728_at 1445111_at 1453977_at 1459706_at	6211	0.284	-0.0359	No
24	COPA	1415706_at 1437274_at	6410	0.268	-0.0415	No
25	EDNRB	1423594_a_at 1426314_at 1437347_at	7109	0.215	-0.0706	No
26	EXOC5	1436817_at 1438126_at	7211	0.207	-0.0726	No
27	EXOC2	1428470_at	7220	0.207	-0.0702	No
28	NME2	1448808_a_at	7268	0.204	-0.0697	No
29	EXOC6	1424230_at 1424231_s_at 1435631_x_at 1446375_at 1455385_at 1460576_at	7361	0.198	-0.0713	No
30	CLTA	1421062_s_at 1434540_a_at 1444328_at	7389	0.196	-0.0700	No
31	MET	1422990_at	7588	0.182	-0.0767	No
32	SHC1	1422853_at 1422854_at	7599	0.182	-0.0748	No
33	CAV1	1449145_a_at	7723	0.172	-0.0781	No
34	ARF6	1418822_a_at 1418823_at 1418824_at	8050	0.150	-0.0911	No
35	GNA14	1420385_at 1447791_s_at 1449848_at 1458738_at	8201	0.140	-0.0962	No
36	HRAS	1422407_s_at 1424132_at	8526	0.118	-0.1095	No
37	KALRN	1429796_at 1436066_at 1442341_at 1442554_s_at 1445900_at 1448023_at 1457690_at 1457899_at 1459065_at	8910	0.095	-0.1258	No
38	IQSEC2	1436622_at 1444621_at 1448063_at	8979	0.091	-0.1277	No
39	HGF	1425379_at 1442884_at 1451866_a_at	9381	0.065	-0.1452	No
40	AGTR1	1436739_at 1446527_at	9632	0.050	-0.1560	No
41	AP2A1	1460724_at	10219	0.012	-0.1828	No
42	LHCGR	1450192_at	10394	0.001	-0.1907	No
43	CDH1	1443509_at 1448261_at	10447	-0.002	-0.1931	No
44	GSK3B	1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at	10461	-0.003	-0.1936	No
45	PIP5K1C	1450228_a_at	10547	-0.008	-0.1974	No
46	NME1	1424110_a_at 1435277_x_at	10739	-0.020	-0.2059	No
47	MAPK1	1419568_at 1426585_s_at 1442876_at 1453104_at	11428	-0.064	-0.2366	No
48	EGF	1418093_a_at	11572	-0.072	-0.2422	No
49	GRB10	1425457_a_at 1425458_a_at 1430164_a_at 1440935_at 1441620_at 1446921_at	11903	-0.093	-0.2561	No
50	STXBP4	1442267_at 1446648_at 1451063_at 1453989_at 1455706_at	11959	-0.096	-0.2574	No
51	GNA11	1434254_at 1449144_at	12423	-0.125	-0.2770	No
52	SRC	1423240_at 1450918_s_at	12489	-0.129	-0.2783	No
53	TRIP10	1418092_s_at	12569	-0.134	-0.2801	No
54	IQSEC1	1427145_at 1452327_at	12726	-0.144	-0.2854	No
55	SOS1	1421884_at 1421885_at 1421886_at	13126	-0.170	-0.3015	No
56	PPP1R3A	1422108_at	13427	-0.189	-0.3127	No
57	FBXO8	1418510_s_at	13444	-0.190	-0.3110	No
58	ARF1	1420920_a_at 1426390_a_at	13568	-0.198	-0.3140	No
59	CTNNB1	1420811_a_at 1430533_a_at 1450008_a_at	13598	-0.201	-0.3127	No
60	TSHR	1421999_at 1428001_at	14490	-0.261	-0.3501	No
61	INSR	1421380_at 1450225_at	14516	-0.264	-0.3478	No
62	YWHAE	1426384_a_at 1426385_x_at 1435702_s_at 1438839_a_at 1440841_at 1457173_at	14726	-0.281	-0.3537	No
63	RASA1	1426476_at 1426477_at 1426478_at 1438998_at	14953	-0.296	-0.3602	No
64	GRB14	1417673_at 1457526_at	15561	-0.341	-0.3836	No
65	PXN	1424027_at 1426085_a_at 1456135_s_at	15926	-0.371	-0.3954	No
66	RHOA	1437628_s_at	15960	-0.374	-0.3920	No
67	PTPRA	1425340_a_at 1447467_at	16497	-0.421	-0.4110	No
68	RHOQ	1427918_a_at 1440925_at	17204	-0.489	-0.4370	No
69	GOSR2	1419371_s_at 1419372_at	17419	-0.514	-0.4401	Yes
70	NCK2	1416796_at 1416797_at 1458432_at	17570	-0.528	-0.4400	Yes
71	DOK1	1417790_at	17688	-0.543	-0.4383	Yes
72	PIP5K1A	1421833_at 1421834_at 1450389_s_at	17869	-0.566	-0.4391	Yes
73	ITGA2B	1417758_at 1442361_at	17956	-0.577	-0.4355	Yes
74	PTPN11	1421196_at 1427699_a_at 1451225_at	18189	-0.608	-0.4382	Yes
75	GNAQ	1428938_at 1428939_s_at 1428940_at 1429559_at 1446688_at 1447593_x_at 1450115_at 1455729_at 1458159_at	18298	-0.623	-0.4350	Yes
76	RAC1	1423734_at 1437674_at 1451086_s_at	18330	-0.627	-0.4282	Yes
77	SLC2A4	1415958_at 1415959_at	18487	-0.650	-0.4268	Yes
78	PTPN1	1417068_a_at 1438670_at	18535	-0.658	-0.4203	Yes
79	EIF4EBP1	1417562_at 1417563_at 1434976_x_at	18621	-0.670	-0.4154	Yes
80	NCK1	1421487_a_at 1424543_at 1447271_at	18677	-0.679	-0.4091	Yes
81	PRKCZ	1418085_at 1449692_at 1454902_at	18718	-0.686	-0.4019	Yes
82	YWHAH	1416004_at	18791	-0.697	-0.3961	Yes
83	RAB11FIP3	1438022_at 1457864_at	18822	-0.701	-0.3883	Yes
84	MAPK3	1427060_at	18852	-0.706	-0.3804	Yes
85	GIT1	1454759_at	18962	-0.723	-0.3759	Yes
86	GYS1	1450196_s_at	19031	-0.735	-0.3694	Yes
87	SFN	1448612_at	19108	-0.749	-0.3630	Yes
88	RAB11A	1449256_a_at	19146	-0.755	-0.3549	Yes
89	GNA15	1421302_a_at	19235	-0.772	-0.3488	Yes
90	PPP1CC	1440594_at	19363	-0.795	-0.3442	Yes
91	CTNNA1	1437275_at 1437807_x_at 1443662_at 1448149_at	19561	-0.833	-0.3423	Yes
92	ARFGAP1	1427245_at 1445067_at	19622	-0.846	-0.3340	Yes
93	YWHAB	1420878_a_at 1420879_a_at 1420880_a_at 1436783_x_at 1438708_x_at 1455815_a_at	19654	-0.852	-0.3242	Yes
94	GGA3	1438008_at	19661	-0.853	-0.3133	Yes
95	YWHAQ	1420828_s_at 1420829_a_at 1420830_x_at 1432842_s_at 1437608_x_at 1454378_at 1460590_s_at 1460621_x_at	19700	-0.861	-0.3038	Yes
96	RAPGEF1	1421146_at 1427006_at 1441386_at	19760	-0.875	-0.2950	Yes
97	STX4	1451573_a_at	19823	-0.889	-0.2862	Yes
98	PLD1	1425739_at 1437112_at 1437113_s_at	19967	-0.925	-0.2807	Yes
99	SCAMP2	1416611_at 1448404_at	20073	-0.951	-0.2730	Yes
100	PLAUR	1452521_a_at	20150	-0.969	-0.2638	Yes
101	DNM2	1423629_at 1425135_a_at 1425136_x_at 1432004_a_at 1432005_at 1437938_x_at 1443150_at 1451057_x_at	20174	-0.974	-0.2521	Yes
102	TIAM1	1418057_at 1444373_at 1453887_a_at	20197	-0.980	-0.2403	Yes
103	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	20278	-1.001	-0.2308	Yes
104	SORBS1	1417358_s_at 1425826_a_at 1428471_at 1436737_a_at 1440311_at 1442401_at 1443983_at 1455967_at	20403	-1.025	-0.2231	Yes
105	KIF13B	1433158_at 1433159_at 1436056_at 1453276_at	20443	-1.034	-0.2113	Yes
106	EGFR	1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at	20486	-1.045	-0.1995	Yes
107	JUP	1426873_s_at	20619	-1.085	-0.1914	Yes
108	PRKCI	1417410_s_at 1448695_at	20656	-1.094	-0.1787	Yes
109	AKT2	1421324_a_at 1424480_s_at 1455703_at	20705	-1.113	-0.1663	Yes
110	ARFIP2	1424240_at 1435498_at	20747	-1.131	-0.1534	Yes
111	VAMP2	1420833_at 1420834_at	20748	-1.131	-0.1386	Yes
112	CD4	1419696_at 1427779_a_at	20765	-1.140	-0.1243	Yes
113	GBF1	1415709_s_at 1415757_at 1432677_at 1438207_at	20847	-1.177	-0.1126	Yes
114	CLTB	1453063_at 1456797_at 1460740_at	20923	-1.218	-0.1001	Yes
115	BIN1	1423618_at 1425532_a_at 1444120_at	20977	-1.244	-0.0863	Yes
116	ADRB2	1437302_at	21407	-1.565	-0.0854	Yes
117	PDPK1	1415729_at 1416501_at 1459775_at 1459776_x_at	21474	-1.629	-0.0671	Yes
118	ARRB2	1426239_s_at 1451987_at	21574	-1.756	-0.0486	Yes
119	ARRB1	1460444_at	21714	-2.119	-0.0272	Yes
120	ITGB3	1421511_at 1455257_at	21829	-2.846	0.0048	Yes